| description |
EMBOSS is "The European Molecular Biology Open Software Suite", a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. |
| version |
6.3.1 |
| homepage |
http://emboss.sourceforge.net/ |
| commands |
aaindexextract abiview acdc acdpretty acdtable acdtrace acdvalid aligncopy aligncopypair antigenic backtranambig backtranseq banana biosed btwisted cai chaos charge checktrans chips cirdna codcmp codcopy coderet compseq cons consambig cpgplot cpgreport cusp cutgextract cutseq dan dbiblast dbifasta dbiflat dbigcg dbxfasta dbxflat dbxgcg degapseq density descseq diffseq digest distmat dotmatcher dotpath dottup dreg edialign einverted embossdata embossversion emma emowse entret epestfind eprimer3 equicktandem est2genome etandem extractalign extractfeat extractseq featcopy featreport findkm freak fuzznuc fuzzpro fuzztran garnier geecee getorf helixturnhelix hmoment iep infoalign infobase inforesidue infoseq isochore jaspextract jaspscan jembossctl lindna listor makenucseq makeprotseq marscan maskambignuc maskambigprot maskfeat maskseq matcher megamerger merger msbar mwcontam mwfilter needle needleall newcpgreport newcpgseek newseq nohtml noreturn nospace notab notseq nthseq nthseqset octanol oddcomp palindrome pasteseq patmatdb patmatmotifs pepcoil pepinfo pepnet pepstats pepwheel pepwindow pepwindowall plotcon plotorf polydot preg prettyplot prettyseq primersearch printsextract profit prophecy prophet prosextract pscan psiphi rebaseextract recoder redata remap restover restrict revseq seealso seqmatchall seqret seqretsetall seqretsplit showalign showdb showfeat showorf showpep showseq shuffleseq sigcleave silent sirna sixpack sizeseq skipredundant skipseq splitsource splitter stretcher stssearch supermatcher syco tcode textsearch tfextract tfm tfscan tmap tranalign transeq trimest trimseq trimspace twofeat union vectorstrip water whichdb wobble wordcount wordfinder wordmatch wossname yank |
| manpages |
aaindexextract abiview acdc acdpretty acdtable acdtrace acdvalid aligncopy aligncopypair antigenic backtranambig backtranseq banana biosed btwisted cai chaos charge checktrans chips cirdna codcmp codcopy coderet compseq cons consambig cpgplot cpgreport cusp cutgextract cutseq dan dbiblast dbifasta dbiflat dbigcg dbxfasta dbxflat dbxgcg degapseq density descseq diffseq digest distmat dotmatcher dotpath dottup dreg edialign einverted embossdata embossversion emma emowse entret epestfind eprimer3 equicktandem est2genome etandem extractalign extractfeat extractseq featcopy featreport findkm freak fuzznuc fuzzpro fuzztran garnier geecee getorf helixturnhelix hmoment iep infoalign infobase inforesidue infoseq isochore jaspextract jaspscan jembossctl lindna listor makenucseq makeprotseq marscan maskambignuc maskambigprot maskfeat maskseq matcher megamerger merger msbar mwcontam mwfilter needle needleall newcpgreport newcpgseek newseq nohtml noreturn nospace notab notseq nthseq nthseqset octanol oddcomp palindrome pasteseq patmatdb patmatmotifs pepcoil pepinfo pepnet pepstats pepwheel pepwindow pepwindowall plotcon plotorf polydot preg prettyplot prettyseq primersearch printsextract profit prophecy prophet prosextract pscan psiphi rebaseextract recoder redata remap restover restrict revseq seealso seqmatchall seqret seqretsetall seqretsplit showalign showdb showfeat showorf showpep showseq shuffleseq sigcleave silent sirna sixpack sizeseq skipredundant skipseq splitsource splitter stretcher stssearch supermatcher syco tcode textsearch tfextract tfm tfscan tmap tranalign transeq trimest trimseq trimspace twofeat union vectorstrip water whichdb wobble wordcount wordfinder wordmatch wossname yank |
| documentation |
http://bioweb2.pasteur.fr/docs/EMBOSS/
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| interfaces |
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