Biological Software: Protein secondary structure.



dssp
description Definition of secondary structure of proteins given a set of 3D coordinates.
version 2000
homepage http://swift.cmbi.ru.nl/gv/dssp/
commands dssp
manpages
documentation
interfaces dssp

ncoils
description Coiled-coils protein prediction
version 2.2
homepage http://www.ch.embnet.org/software/coils/COILS_doc.html
commands ncoils
manpages
documentation
interfaces

predator
description Protein secondary structure prediction software.
version 2.1.2
homepage
commands predator
manpages predator
documentation http://bioweb2.pasteur.fr/docs/predator/predator.txt
interfaces predator

tmhmm
description prediction of transmembrane helices in proteins.
version 2.0C
homepage http://www.cbs.dtu.dk/services/TMHMM
commands tmhmm
manpages
documentation http://bioweb2.pasteur.fr/docs/tmhmm/
interfaces

toppred
description Transmembrane topology prediction.
version 1.10
homepage
commands toppred
manpages toppred
documentation http://bioweb2.pasteur.fr/docs/toppred/toppred.pdf
interfaces toppred


Last update: February, 10 2012