Biological Software: Formatter tools .



chromats
description Small tools for sequencer trace data.
version 0.99
homepage
commands chrphd chrstat
manpages chrphd chrstat
documentation
interfaces

concatfasta
description Concatanation of two fasta files with same identifier
version 1.00
homepage
commands concatfasta
manpages
documentation
interfaces concatfasta

fastaRename
description parse a file with fasta sequences replace the identifier of a fasta sequences by a short identifier and generate a file with renamed fasta sequences and a file of mapping
version 1.0
homepage
commands fastaRename
manpages
documentation
interfaces

validate_gff3.pl
description This script validates a given GFF3 file
version r16092
homepage http://modencode.oicr.on.ca/cgi-bin/validate_gff3_online
commands validate_gff3.pl
manpages validate_gff3.man
documentation
interfaces

squizz
description Sequence/Alignment format checker.
version 0.99a
homepage
commands squizz
manpages squizz seqfmt alifmt
documentation http://bioweb2.pasteur.fr/docs/squizz/alifmt.html
http://bioweb2.pasteur.fr/docs/squizz/seqfmt.html
interfaces squizz_checker squizz_convert


Last update: February, 9 2012