Biological Software: Phylogenetic Bayesian Analysis methods.



bambe
description Bayesian Analysis in Molecular Biology and Evolution.
version 4.01
homepage http://www.stat.wisc.edu/~larget/
commands bambe meansd summarize
manpages
documentation
interfaces bambe

mrbayes
description MrBayes is a program for the Bayesian estimation of phylogeny.
version 3.1.2
homepage http://mrbayes.csit.fsu.edu/
commands mb
manpages
documentation
interfaces

p4
description A Python Package for Phylogenetics
version 0.87.r132
homepage http://www.nhm.ac.uk/research-curation/research/projects/p4/index.html
commands p4
manpages
documentation
interfaces

Phylobayes
description PhyloBayes is a Bayesian Monte Carlo Markov Chain (MCMC) sampler for phylogenetic reconstruction using protein alignments.
version 2.3c
homepage http://www.lirmm.fr/mab/article.php3?id_article=329
commands bf bpcomp cvrep pbayes ppred readcv readdiv readpb stoppb sumcv tree2ps
manpages
documentation
interfaces


Last update: February, 9 2012