Biological Software: Rapidly aligning entire genomes.



Mauve
description Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion
version 2.3.1
homepage http://asap.ahabs.wisc.edu/mauve/
commands Mauve progressiveMauve mauveAligner
manpages
documentation http://bioweb2.pasteur.fr/docs/Mauve/mauve_user_guide.pdf
interfaces

MUMer
description MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form
version 3.22
homepage http://mummer.sourceforge.net/
commands run-mummer1 run-mummer3 nucmer promer mummerplot dnadiff annotate_MUMmer combineMUMs delta-filter exact-tandems gaps mapview mgaps mummer nucmer2xfig repeat-match show-aligns show-coords show-diff show-snps show-tiling
manpages
documentation
interfaces


Last update: February, 9 2012