| description | The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. |
| version | 2.2.21 |
| homepage | http://www.ncbi.nlm.nih.gov/BLAST/ |
| commands | bl2seq blastall blastclust blastpgp copymat fastacmd formatdb formatrpsdb impala makemat megablast rpsblast seedtop |
| manpages | bl2seq blast blastall blastclust blastpgp copymat fastacmd formatdb formatrpsdb impala makemat megablast rpsblast seedtop |
| documentation |
http://bioweb2.pasteur.fr/docs/blast/ |
| interfaces | bl2seq blast2 phiblast psiblast blast2mydb |
| description | The program combat implements the method for combined DNA/protein alignment. |
| version | 1.0 |
| homepage | http://www.daimi.au.dk/~cstorm/combat/ |
| commands | combat combine combvert |
| manpages | combat |
| documentation | |
| interfaces | combat |
| description | Wise2 is a package focused on comparisons of bio polymers, commonly DNA sequence and protein sequence. |
| version | 2.2.0 |
| homepage | http://www.ebi.ac.uk/Tools/Wise2/doc_wise2.html |
| commands | pswdb psw genewisedb estwisedb estwise genewise dba dnal genomewise |
| manpages | |
| documentation | |
| interfaces | wise2 |